Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814105.1_cds_XP_016497810.1_11902
CDS Infomation

[gene=LOC107816599] [db_xref=GeneID:107816599] [protein=zingipain-2-like] [protein_id=XP_016497810.1] [location=complement(join(14239..14322,14618..15049,15139..15279,15466..15701,17027..17453))] [gbkey=CDS]
Sequence

ATGAGTTGGTTATGGCCATCTTTGGTTATTGTACTGTTAATTTTTCAAGGACCAATTTGC
ACTTGTTCATCAATTTCTGATCTTTTTGAAACTTGGTGTCAGCAAAATGGAAAATCATAT
TCTTCTGAACAAGAAAGGGTGTATAGGCTCAAGGTGTTTGAAGAAAATTATGCTTATATT
ATAGAGCATAATAGTAAGGGGAATTCCACTTATACCCTTGGTCTTAATGCCTATTCTGAT
CTCACTCACCATGAATTCAAGAACTCTTTTTTGGGTTTGTCCTCTTCTGCTAATGATTTT
ATTAGATTGAAAACTGGGTCATCTTCTGCTGGAGTTTTCAGTGATGTTGGTGATGTTGAT
GTTCCTTCTTCTTTGGATTGGAGAGAGAAAGGAGCTGTTACTAAAGTCAAAAATCAAGGC
AGTTGTGGTGCTTGCTGGTCATTCTCAGCCACTGGAGCAATTGAAGGTATCAACAAGATT
GTGTCTGGATCTCTTGTGAGTCTCTCTGAGCAGGAGTTAATTGATTGCGACAAAAGTTAC
AATGACGGCTGTGGAGGTGGATTGATGGACTATGCTTTTGAATTTGTCAAAAAGAATGGT
GGTATTGATACTGAAGAGGATTACCCTTTTATTGAAAGAGAAGGAACATGCAACAAAAAC
AAGCTACAAAGACGTGTTGTAACCATTGATGGATATACTGATGTTCCCCAAAATGATGAG
GACAAGCTTCTAAAAGCTGTGGCAAAGCAACCCGTGAGTGTTGGGATATGCGGCAGTGAG
AGAGCATTTCAATCATATTCGAAGGGGATATTCACTGGGCCGTGTTCTACTGCATTAGAT
CATGCAGTACTGATTGTGGGCTATGGTTCCGAAAATGGAGTTGATTACTGGATTATAAAA
AATTCATGGGGAACAAGCTGGGGAATAAATGGTTATATGCACATGCAGCGTAATAGTGGG
AATCAAGAAGGGATCTGTGGGATCAATAAGCTAGCTTCATATCCAACTAAGAGTAGCCCA
AATCCACCATCTCCTCCATCTCCTGGTCCAAGCAAATGCAGTATGTTTACCTCATGTGGT
CAAGGTGAAACCTGCTGCTGTGGTTGGAGTCTTCTTGGAGTATGCCTTTCTTGGAAATGT
TGTGGGTTGGATTCTGCAGTGTGTTGCAAAGATGGACGCCACTGTTGCCCGCATGATTAT
CCTATTTGTGACACAAGCCGGAACCTCTGCCTCAAGCGAATGAGCAATGCAACTATAGTG
CAACAGCCTCAGAAGGAAGCATTTTCTGGGAAGTTCGGAGGTCTAATTTACCCTTTCTAG

Peptide Sequence

PEP ID

XP_016497810.1
PEP Infomation

PREDICTED: zingipain-2-like [Nicotiana tabacum]
Sequence

MSWLWPSLVIVLLIFQGPICTCSSISDLFETWCQQNGKSYSSEQERVYRLKVFEENYAYI
IEHNSKGNSTYTLGLNAYSDLTHHEFKNSFLGLSSSANDFIRLKTGSSSAGVFSDVGDVD
VPSSLDWREKGAVTKVKNQGSCGACWSFSATGAIEGINKIVSGSLVSLSEQELIDCDKSY
NDGCGGGLMDYAFEFVKKNGGIDTEEDYPFIEREGTCNKNKLQRRVVTIDGYTDVPQNDE
DKLLKAVAKQPVSVGICGSERAFQSYSKGIFTGPCSTALDHAVLIVGYGSENGVDYWIIK
NSWGTSWGINGYMHMQRNSGNQEGICGINKLASYPTKSSPNPPSPPSPGPSKCSMFTSCG
QGETCCCGWSLLGVCLSWKCCGLDSAVCCKDGRHCCPHDYPICDTSRNLCLKRMSNATIV
QQPQKEAFSGKFGGLIYPF

Transcript Sequence

Gene sequence data has not been registered.